No. words: 1495; after pruning: 1469


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:1002)  463  0.41 0.00 0.00  UCD015F_B08_BE490763Ta12P025H10P012G121F1_062.ab1      281   772 (0)  C UCD015R_B08_BE490763Ta12P025H10P012G121R1_062.ab1   (0)   723   232 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1    UCD015F_B08_BE490763Ta12P025H10P012G121F1_062.ab1     1 
  453  C UCD015R_B08_BE490763Ta12P025H10P012G121R1_062.ab1   551 
  469    UCD015F_B08_BE490763Ta12P025H10P012G121F1_062.ab1   469 
  477  C UCD015R_B08_BE490763Ta12P025H10P012G121R1_062.ab1   527 
  481    UCD015F_B08_BE490763Ta12P025H10P012G121F1_062.ab1   481 
  485  C UCD015R_B08_BE490763Ta12P025H10P012G121R1_062.ab1   519 
  489    UCD015F_B08_BE490763Ta12P025H10P012G121F1_062.ab1   489 
  505  C UCD015R_B08_BE490763Ta12P025H10P012G121R1_062.ab1   499 
  521    UCD015F_B08_BE490763Ta12P025H10P012G121F1_062.ab1   521 
  525  C UCD015R_B08_BE490763Ta12P025H10P012G121R1_062.ab1   479 
  529    UCD015F_B08_BE490763Ta12P025H10P012G121F1_062.ab1   529 
  533  C UCD015R_B08_BE490763Ta12P025H10P012G121R1_062.ab1   471 
  537    UCD015F_B08_BE490763Ta12P025H10P012G121F1_062.ab1   537 
  541  C UCD015R_B08_BE490763Ta12P025H10P012G121R1_062.ab1   463 
  545    UCD015F_B08_BE490763Ta12P025H10P012G121F1_062.ab1   545 
  549  C UCD015R_B08_BE490763Ta12P025H10P012G121R1_062.ab1   455 
Contig length: old 1003, new 1003

Contig length: old 1003, new 1003
New start: 0