No. words: 1294; after pruning: 1268


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:904)  367  0.26 0.00 0.00  UCD028F_G11_BE490763Ta13P025A11P036B031F1_083.ab1      234   622 (0)  C UCD028R_G11_BE490763Ta13P025A11P036B031R1_083.ab1   (0)   672   284 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  192 nodes

 98 str. conn. components

Path
    1    UCD028F_G11_BE490763Ta13P025A11P036B031F1_083.ab1     1 
  341  C UCD028R_G11_BE490763Ta13P025A11P036B031R1_083.ab1   565 
  345    UCD028F_G11_BE490763Ta13P025A11P036B031F1_083.ab1   345 
  357  C UCD028R_G11_BE490763Ta13P025A11P036B031R1_083.ab1   549 
  369    UCD028F_G11_BE490763Ta13P025A11P036B031F1_083.ab1   369 
  377  C UCD028R_G11_BE490763Ta13P025A11P036B031R1_083.ab1   529 
Contig length: old 905, new 905

Contig length: old 905, new 905
New start: 0