No. words: 1389; after pruning: 1363


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:964)  397  0.24 0.24 0.00  UCD015F_D08_BE490763Ta14P025H10P012G121F1_058.ab1      234   656 (0)  C UCD015R_D08_BE490763Ta14P025H10P012G121R1_058.ab1   (0)   733   310 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  210 nodes

 107 str. conn. components

Path
    1    UCD015F_D08_BE490763Ta14P025H10P012G121F1_058.ab1     1 
  361  C UCD015R_D08_BE490763Ta14P025H10P012G121R1_058.ab1   606 
  365    UCD015F_D08_BE490763Ta14P025H10P012G121F1_058.ab1   365 
  369  C UCD015R_D08_BE490763Ta14P025H10P012G121R1_058.ab1   598 
Contig length: old 965, new 966

Contig length: old 966, new 966
New start: 0