No. words: 1048; after pruning: 1022


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.7 (1,1:836)  195  0.00 0.00 0.00  UCD029F_E02_BE490763Ta15P025C11P036B031F1_008.ab1       97   307 (0)  C UCD029R_E02_BE490763Ta15P025C11P036B031R1_008.ab1   (0)   741   531 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  106 nodes

 55 str. conn. components

Path
    1    UCD029F_E02_BE490763Ta15P025C11P036B031F1_008.ab1     1 
  105  C UCD029R_E02_BE490763Ta15P025C11P036B031R1_008.ab1   733 
  109    UCD029F_E02_BE490763Ta15P025C11P036B031F1_008.ab1   109 
  193  C UCD029R_E02_BE490763Ta15P025C11P036B031R1_008.ab1   645 
  197    UCD029F_E02_BE490763Ta15P025C11P036B031F1_008.ab1   197 
  217  C UCD029R_E02_BE490763Ta15P025C11P036B031R1_008.ab1   621 
  237    UCD029F_E02_BE490763Ta15P025C11P036B031F1_008.ab1   237 
  245  C UCD029R_E02_BE490763Ta15P025C11P036B031R1_008.ab1   593 
  257    UCD029F_E02_BE490763Ta15P025C11P036B031F1_008.ab1   257 
  261  C UCD029R_E02_BE490763Ta15P025C11P036B031R1_008.ab1   577 
Contig length: old 837, new 837

Contig length: old 837, new 837
New start: 0