No. words: 1270; after pruning: 1244


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.1 (1,1:992)  259  0.00 0.00 0.00  UCD015F_E08_BE490763Ta15P025H10P012G121F1_056.ab1      534   810 (0)  C UCD015R_E08_BE490763Ta15P025H10P012G121R1_056.ab1   (0)   460   184 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1    UCD015F_E08_BE490763Ta15P025H10P012G121F1_056.ab1     1 
  597  C UCD015R_E08_BE490763Ta15P025H10P012G121R1_056.ab1   397 
  601    UCD015F_E08_BE490763Ta15P025H10P012G121F1_056.ab1   601 
  605  C UCD015R_E08_BE490763Ta15P025H10P012G121R1_056.ab1   389 
Contig length: old 993, new 993

Contig length: old 993, new 993
New start: 0