No. words: 1490; after pruning: 1464


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.0 (1,1:867)  578  0.00 0.00 0.32  UCD029F_F02_BE490763Ta16P025C11P036B031F1_006.ab1       46   667 (0)  C UCD029R_F02_BE490763Ta16P025C11P036B031R1_006.ab1   (0)   823   204 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1    UCD029F_F02_BE490763Ta16P025C11P036B031F1_006.ab1     1 
  321  C UCD029R_F02_BE490763Ta16P025C11P036B031R1_006.ab1   548 
  353    UCD029F_F02_BE490763Ta16P025C11P036B031F1_006.ab1   353 
  357  C UCD029R_F02_BE490763Ta16P025C11P036B031R1_006.ab1   512 
Contig length: old 868, new 868

Contig length: old 868, new 868
New start: 0