No. words: 1295; after pruning: 1269


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:894)  374  0.50 0.00 0.00  UCD028F_C12_BE490763Ta17P025A11P036B031F1_092.ab1       61   460 (0)  C UCD028R_C12_BE490763Ta17P025A11P036B031R1_092.ab1   (0)   835   436 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  194 nodes

 99 str. conn. components

Path
    1    UCD028F_C12_BE490763Ta17P025A11P036B031F1_092.ab1     1 
  211  C UCD028R_C12_BE490763Ta17P025A11P036B031R1_092.ab1   685 
  215    UCD028F_C12_BE490763Ta17P025A11P036B031F1_092.ab1   215 
  231  C UCD028R_C12_BE490763Ta17P025A11P036B031R1_092.ab1   665 
  235    UCD028F_C12_BE490763Ta17P025A11P036B031F1_092.ab1   235 
  255  C UCD028R_C12_BE490763Ta17P025A11P036B031R1_092.ab1   641 
  263    UCD028F_C12_BE490763Ta17P025A11P036B031F1_092.ab1   263 
  271  C UCD028R_C12_BE490763Ta17P025A11P036B031R1_092.ab1   625 
  279    UCD028F_C12_BE490763Ta17P025A11P036B031F1_092.ab1   279 
  287  C UCD028R_C12_BE490763Ta17P025A11P036B031R1_092.ab1   609 
  291    UCD028F_C12_BE490763Ta17P025A11P036B031F1_092.ab1   291 
  307  C UCD028R_C12_BE490763Ta17P025A11P036B031R1_092.ab1   589 
Contig length: old 895, new 895

Contig length: old 895, new 895
New start: 0