No. words: 1447; after pruning: 1421


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 8.6 (1,1:900)  504  0.18 0.00 0.18  UCD028F_D12_BE490763Ta18P025A11P036B031F1_090.ab1      166   706 (5)  C UCD028R_D12_BE490763Ta18P025A11P036B031R1_090.ab1   (0)   736   197 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  264 nodes

 134 str. conn. components

Path
    1    UCD028F_D12_BE490763Ta18P025A11P036B031F1_090.ab1     1 
  252  C UCD028R_D12_BE490763Ta18P025A11P036B031R1_090.ab1   650 
  256    UCD028F_D12_BE490763Ta18P025A11P036B031F1_090.ab1   256 
  316  C UCD028R_D12_BE490763Ta18P025A11P036B031R1_090.ab1   586 
  320    UCD028F_D12_BE490763Ta18P025A11P036B031F1_090.ab1   320 
  352  C UCD028R_D12_BE490763Ta18P025A11P036B031R1_090.ab1   550 
  364    UCD028F_D12_BE490763Ta18P025A11P036B031F1_090.ab1   364 
  376  C UCD028R_D12_BE490763Ta18P025A11P036B031R1_090.ab1   526 
Contig length: old 901, new 901

Contig length: old 901, new 901
New start: 0