No. words: 1520; after pruning: 1494


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   18    0.0 6.6 (1,1:992)  470  0.98 0.00 0.00  UCD015F_H08_BE490763Ta18P025H10P012G121F1_050.ab1      274   782 (0)  C UCD015R_H08_BE490763Ta18P025H10P012G121R1_050.ab1   (18)   720   212 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
18       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1    UCD015F_H08_BE490763Ta18P025H10P012G121F1_050.ab1     1 
  475  C UCD015R_H08_BE490763Ta18P025H10P012G121R1_050.ab1   519 
  483    UCD015F_H08_BE490763Ta18P025H10P012G121F1_050.ab1   483 
  487  C UCD015R_H08_BE490763Ta18P025H10P012G121R1_050.ab1   507 
  491    UCD015F_H08_BE490763Ta18P025H10P012G121F1_050.ab1   491 
  503  C UCD015R_H08_BE490763Ta18P025H10P012G121R1_050.ab1   491 
  511    UCD015F_H08_BE490763Ta18P025H10P012G121F1_050.ab1   511 
  527  C UCD015R_H08_BE490763Ta18P025H10P012G121R1_050.ab1   467 
  535    UCD015F_H08_BE490763Ta18P025H10P012G121F1_050.ab1   535 
  539  C UCD015R_H08_BE490763Ta18P025H10P012G121R1_050.ab1   455 
  583    UCD015F_H08_BE490763Ta18P025H10P012G121F1_050.ab1   583 
  591  C UCD015R_H08_BE490763Ta18P025H10P012G121R1_050.ab1   403 
  603    UCD015F_H08_BE490763Ta18P025H10P012G121F1_050.ab1   603 
  607  C UCD015R_H08_BE490763Ta18P025H10P012G121R1_050.ab1   387 
Contig length: old 993, new 993

Contig length: old 993, new 993
New start: 0