No. words: 1452; after pruning: 1412


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.1 (1,1:896)  510  0.54 0.00 0.36  UCD028F_F12_BE490763Ta20P025A11P036B031F1_086.ab1       62   616 (0)  C UCD028R_F12_BE490763Ta20P025A11P036B031R1_086.ab1   (0)   836   284 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  264 nodes

 134 str. conn. components

Path
    1    UCD028F_F12_BE490763Ta20P025A11P036B031F1_086.ab1     1 
  353  C UCD028R_F12_BE490763Ta20P025A11P036B031R1_086.ab1   545 
  369    UCD028F_F12_BE490763Ta20P025A11P036B031F1_086.ab1   369 
  377  C UCD028R_F12_BE490763Ta20P025A11P036B031R1_086.ab1   521 
Contig length: old 897, new 897

Contig length: old 897, new 897
New start: 0