No. words: 1654; after pruning: 1628


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.7 (1,1:989)  635  0.00 0.00 0.00  UCD015F_D09_BE490763Ta22P025H10P012G121F1_073.ab1      192   855 (0)  C UCD015R_D09_BE490763Ta22P025H10P012G121R1_073.ab1   (0)   799   136 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  334 nodes

 169 str. conn. components

Path
    1    UCD015F_D09_BE490763Ta22P025H10P012G121F1_073.ab1     1 
  391  C UCD015R_D09_BE490763Ta22P025H10P012G121R1_073.ab1   600 
  423    UCD015F_D09_BE490763Ta22P025H10P012G121F1_073.ab1   423 
  427  C UCD015R_D09_BE490763Ta22P025H10P012G121R1_073.ab1   564 
  511    UCD015F_D09_BE490763Ta22P025H10P012G121F1_073.ab1   511 
  515  C UCD015R_D09_BE490763Ta22P025H10P012G121R1_073.ab1   476 
Contig length: old 990, new 990

Contig length: old 990, new 990
New start: 0