No. words: 1507; after pruning: 1481


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:994)  488  0.00 0.00 0.00  UCD015F_E09_BE490763Ta23P025H10P012G121F1_071.ab1      266   777 (0)  C UCD015R_E09_BE490763Ta23P025H10P012G121R1_071.ab1   (0)   730   219 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1    UCD015F_E09_BE490763Ta23P025H10P012G121F1_071.ab1     1 
  389  C UCD015R_E09_BE490763Ta23P025H10P012G121R1_071.ab1   607 
  401    UCD015F_E09_BE490763Ta23P025H10P012G121F1_071.ab1   401 
  413  C UCD015R_E09_BE490763Ta23P025H10P012G121R1_071.ab1   583 
  421    UCD015F_E09_BE490763Ta23P025H10P012G121F1_071.ab1   421 
  425  C UCD015R_E09_BE490763Ta23P025H10P012G121R1_071.ab1   571 
  441    UCD015F_E09_BE490763Ta23P025H10P012G121F1_071.ab1   441 
  445  C UCD015R_E09_BE490763Ta23P025H10P012G121R1_071.ab1   551 
Contig length: old 995, new 995

Contig length: old 995, new 995
New start: 0