No. words: 1478; after pruning: 1452


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -1.2 -1.2 (1,1:992)  419  2.89 0.00 0.00  UCD015F_F07_BE490763Td08P025H10P012G121F1_053.ab1      231   715 (0)  C UCD015R_F07_BE490763Td08P025H10P012G121R1_053.ab1   (0)   763   279 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.2       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  204 nodes

 104 str. conn. components

Path
    1    UCD015F_F07_BE490763Td08P025H10P012G121F1_053.ab1     1 
  367  C UCD015R_F07_BE490763Td08P025H10P012G121R1_053.ab1   627 
Contig length: old 993, new 993

Contig length: old 993, new 993
New start: 0