No. words: 1486; after pruning: 1460


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.9 (1,1:1002)  427  2.28 0.00 0.00  UCD015F_H07_BE490763Td10P025H10P012G121F1_049.ab1      243   725 (0)  C UCD015R_H07_BE490763Td10P025H10P012G121R1_049.ab1   (0)   761   279 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  210 nodes

 107 str. conn. components

Path
    1    UCD015F_H07_BE490763Td10P025H10P012G121F1_049.ab1     1 
  363  C UCD015R_H07_BE490763Td10P025H10P012G121R1_049.ab1   641 
Contig length: old 1003, new 1003

Contig length: old 1003, new 1003
New start: 0