No. words: 1663; after pruning: 1637


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:1112)  532  0.18 0.00 0.00  UCD018F_G01_BE498730LD10P028G02G081F1_003.ab1      238   787 (0)  C UCD018R_G01_BE498730LD10P028G02G081R1_003.ab1   (0)   876   327 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1    UCD018F_G01_BE498730LD10P028G02G081F1_003.ab1     1 
  555  C UCD018R_G01_BE498730LD10P028G02G081R1_003.ab1   559 
Contig length: old 1113, new 1113

Contig length: old 1113, new 1113
New start: 0