No. words: 1051; after pruning: 1025


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:472)  471  0.00 0.00 0.00  UCD007F_F01_BE499251AS01P012D03P012D091F1_005.ab1        1   473 (62)  C UCD007R_F01_BE499251AS01P012D03P012D091R1_005.ab1   (43)   473     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C UCD007R_F01_BE499251AS01P012D03P012D091R1_005.ab1   516 
   91    UCD007F_F01_BE499251AS01P012D03P012D091F1_005.ab1    48 
  135  C UCD007R_F01_BE499251AS01P012D03P012D091R1_005.ab1   382 
  163    UCD007F_F01_BE499251AS01P012D03P012D091F1_005.ab1   120 
  171  C UCD007R_F01_BE499251AS01P012D03P012D091R1_005.ab1   346 
  175    UCD007F_F01_BE499251AS01P012D03P012D091F1_005.ab1   132 
  183  C UCD007R_F01_BE499251AS01P012D03P012D091R1_005.ab1   334 
  195    UCD007F_F01_BE499251AS01P012D03P012D091F1_005.ab1   152 
  279  C UCD007R_F01_BE499251AS01P012D03P012D091R1_005.ab1   238 
  287    UCD007F_F01_BE499251AS01P012D03P012D091F1_005.ab1   244 
  331  C UCD007R_F01_BE499251AS01P012D03P012D091R1_005.ab1   186 
  399    UCD007F_F01_BE499251AS01P012D03P012D091F1_005.ab1   356 
  407  C UCD007R_F01_BE499251AS01P012D03P012D091R1_005.ab1   110 
  447    UCD007F_F01_BE499251AS01P012D03P012D091F1_005.ab1   404 
  455  C UCD007R_F01_BE499251AS01P012D03P012D091R1_005.ab1    62 
  507    UCD007F_F01_BE499251AS01P012D03P012D091F1_005.ab1   464 
Contig length: old 578, new 578

Contig length: old 578, new 578
New start: 0