No. words: 1010; after pruning: 984


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.9 (1,1:454)  446  0.00 0.00 0.22  UCD015F_F02_BE499251Sn24P025H06P012D091F1_006.ab1        1   455 (49)  C UCD015R_F02_BE499251Sn24P025H06P012D091R1_006.ab1   (52)   454     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C UCD015R_F02_BE499251Sn24P025H06P012D091R1_006.ab1   506 
   88    UCD015F_F02_BE499251Sn24P025H06P012D091F1_006.ab1    36 
   92  C UCD015R_F02_BE499251Sn24P025H06P012D091R1_006.ab1   415 
  152    UCD015F_F02_BE499251Sn24P025H06P012D091F1_006.ab1   100 
Contig length: old 555, new 556

Contig length: old 556, new 556
New start: 0