No. words: 1103; after pruning: 1077


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:500)  497  0.00 0.00 0.00  UCD007F_E01_BE499251TU02P012D03P012D091F1_007.ab1        1   501 (55)  C UCD007R_E01_BE499251TU02P012D03P012D091R1_007.ab1   (46)   501     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C UCD007R_E01_BE499251TU02P012D03P012D091R1_007.ab1   547 
   58    UCD007F_E01_BE499251TU02P012D03P012D091F1_007.ab1    12 
   70  C UCD007R_E01_BE499251TU02P012D03P012D091R1_007.ab1   478 
  106    UCD007F_E01_BE499251TU02P012D03P012D091F1_007.ab1    60 
  126  C UCD007R_E01_BE499251TU02P012D03P012D091R1_007.ab1   422 
  142    UCD007F_E01_BE499251TU02P012D03P012D091F1_007.ab1    96 
  146  C UCD007R_E01_BE499251TU02P012D03P012D091R1_007.ab1   402 
  194    UCD007F_E01_BE499251TU02P012D03P012D091F1_007.ab1   148 
  202  C UCD007R_E01_BE499251TU02P012D03P012D091R1_007.ab1   346 
  210    UCD007F_E01_BE499251TU02P012D03P012D091F1_007.ab1   164 
  226  C UCD007R_E01_BE499251TU02P012D03P012D091R1_007.ab1   322 
  246    UCD007F_E01_BE499251TU02P012D03P012D091F1_007.ab1   200 
  338  C UCD007R_E01_BE499251TU02P012D03P012D091R1_007.ab1   210 
  354    UCD007F_E01_BE499251TU02P012D03P012D091F1_007.ab1   308 
  414  C UCD007R_E01_BE499251TU02P012D03P012D091R1_007.ab1   134 
  422    UCD007F_E01_BE499251TU02P012D03P012D091F1_007.ab1   376 
  426  C UCD007R_E01_BE499251TU02P012D03P012D091R1_007.ab1   122 
  434    UCD007F_E01_BE499251TU02P012D03P012D091F1_007.ab1   388 
  450  C UCD007R_E01_BE499251TU02P012D03P012D091R1_007.ab1    98 
  462    UCD007F_E01_BE499251TU02P012D03P012D091F1_007.ab1   416 
  478  C UCD007R_E01_BE499251TU02P012D03P012D091R1_007.ab1    70 
  502    UCD007F_E01_BE499251TU02P012D03P012D091F1_007.ab1   456 
  510  C UCD007R_E01_BE499251TU02P012D03P012D091R1_007.ab1    38 
  526    UCD007F_E01_BE499251TU02P012D03P012D091F1_007.ab1   480 
Contig length: old 602, new 602

Contig length: old 602, new 602
New start: 0