No. words: 1192; after pruning: 1166 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 11.9 (1,1:534) 528 0.00 0.00 0.00 UCD017F_G05_BE500206AS01P028G01G071F1_035.ab1 1 535 (63) C UCD017R_G05_BE500206AS01P028G01G071R1_035.ab1 (59) 535 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 270 nodes 137 str. conn. components Path 1 C UCD017R_G05_BE500206AS01P028G01G071R1_035.ab1 594 115 UCD017F_G05_BE500206AS01P028G01G071F1_035.ab1 56 123 C UCD017R_G05_BE500206AS01P028G01G071R1_035.ab1 472 223 UCD017F_G05_BE500206AS01P028G01G071F1_035.ab1 164 235 C UCD017R_G05_BE500206AS01P028G01G071R1_035.ab1 360 363 UCD017F_G05_BE500206AS01P028G01G071F1_035.ab1 304 367 C UCD017R_G05_BE500206AS01P028G01G071R1_035.ab1 228 459 UCD017F_G05_BE500206AS01P028G01G071F1_035.ab1 400 491 C UCD017R_G05_BE500206AS01P028G01G071R1_035.ab1 104 495 UCD017F_G05_BE500206AS01P028G01G071F1_035.ab1 436 515 C UCD017R_G05_BE500206AS01P028G01G071R1_035.ab1 80 523 UCD017F_G05_BE500206AS01P028G01G071F1_035.ab1 464 551 C UCD017R_G05_BE500206AS01P028G01G071R1_035.ab1 44 567 UCD017F_G05_BE500206AS01P028G01G071F1_035.ab1 508 Contig length: old 657, new 657 Contig length: old 657, new 657 New start: 0