No. words: 1010; after pruning: 984


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (1,1:446)  430  0.00 0.45 0.00  UCD034F_G06_BE500206Sn25P036H11P028G071F1_036.ab1        1   446 (62)  C UCD034R_G06_BE500206Sn25P036H11P028G071R1_036.ab1   (54)   448     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  218 nodes

 111 str. conn. components

Path
    1  C UCD034R_G06_BE500206Sn25P036H11P028G071R1_036.ab1   502 
  282    UCD034F_G06_BE500206Sn25P036H11P028G071F1_036.ab1   226 
  286  C UCD034R_G06_BE500206Sn25P036H11P028G071R1_036.ab1   217 
  294    UCD034F_G06_BE500206Sn25P036H11P028G071F1_036.ab1   238 
  302  C UCD034R_G06_BE500206Sn25P036H11P028G071R1_036.ab1   201 
  334    UCD034F_G06_BE500206Sn25P036H11P028G071F1_036.ab1   278 
  354  C UCD034R_G06_BE500206Sn25P036H11P028G071R1_036.ab1   149 
  358    UCD034F_G06_BE500206Sn25P036H11P028G071F1_036.ab1   302 
  362  C UCD034R_G06_BE500206Sn25P036H11P028G071R1_036.ab1   141 
  370    UCD034F_G06_BE500206Sn25P036H11P028G071F1_036.ab1   314 
  398  C UCD034R_G06_BE500206Sn25P036H11P028G071R1_036.ab1   105 
  406    UCD034F_G06_BE500206Sn25P036H11P028G071F1_036.ab1   350 
  422  C UCD034R_G06_BE500206Sn25P036H11P028G071R1_036.ab1    81 
  430    UCD034F_G06_BE500206Sn25P036H11P028G071F1_036.ab1   374 
  442  C UCD034R_G06_BE500206Sn25P036H11P028G071R1_036.ab1    61 
  450    UCD034F_G06_BE500206Sn25P036H11P028G071F1_036.ab1   394 
  454  C UCD034R_G06_BE500206Sn25P036H11P028G071R1_036.ab1    49 
  458    UCD034F_G06_BE500206Sn25P036H11P028G071F1_036.ab1   402 
  470  C UCD034R_G06_BE500206Sn25P036H11P028G071R1_036.ab1    33 
  478    UCD034F_G06_BE500206Sn25P036H11P028G071F1_036.ab1   422 
Contig length: old 563, new 564

Contig length: old 564, new 564
New start: 0