No. words: 1145; after pruning: 1119


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:515)  504  0.00 0.19 0.00  UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1        1   516 (61)  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   (51)   517     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  256 nodes

 130 str. conn. components

Path
    1  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   568 
   90    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1    38 
  102  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   467 
  142    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1    90 
  158  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   411 
  166    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   114 
  178  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   391 
  182    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   130 
  190  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   379 
  194    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   142 
  198  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   371 
  226    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   174 
  238  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   331 
  242    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   190 
  246  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   323 
  250    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   198 
  254  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   315 
  266    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   214 
  286  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   283 
  294    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   242 
  314  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   255 
  322    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   270 
  342  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   227 
  370    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   318 
  386  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   183 
  394    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   342 
  406  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   163 
  430    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   378 
  462  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1   107 
  470    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   418 
  494  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1    75 
  502    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   450 
  550  C UCD034R_A03_BE500206Sn27P028G01P036F111R1_031.ab1    19 
  554    UCD034F_A03_BE500206Sn27P028G01P036F111F1_031.ab1   502 
Contig length: old 629, new 629

Contig length: old 629, new 629
New start: 0