No. words: 1144; after pruning: 1118


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.3 (1,1:516)  506  0.19 0.00 0.00  UCD034F_D03_BE500206Sn30P028G01P036F111F1_025.ab1        1   517 (58)  C UCD034R_D03_BE500206Sn30P028G01P036F111R1_025.ab1   (52)   517     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1  C UCD034R_D03_BE500206Sn30P028G01P036F111R1_025.ab1   569 
  101    UCD034F_D03_BE500206Sn30P028G01P036F111F1_025.ab1    49 
  105  C UCD034R_D03_BE500206Sn30P028G01P036F111R1_025.ab1   465 
  117    UCD034F_D03_BE500206Sn30P028G01P036F111F1_025.ab1    65 
  125  C UCD034R_D03_BE500206Sn30P028G01P036F111R1_025.ab1   445 
  145    UCD034F_D03_BE500206Sn30P028G01P036F111F1_025.ab1    93 
  181  C UCD034R_D03_BE500206Sn30P028G01P036F111R1_025.ab1   389 
  189    UCD034F_D03_BE500206Sn30P028G01P036F111F1_025.ab1   137 
  201  C UCD034R_D03_BE500206Sn30P028G01P036F111R1_025.ab1   369 
  205    UCD034F_D03_BE500206Sn30P028G01P036F111F1_025.ab1   153 
  229  C UCD034R_D03_BE500206Sn30P028G01P036F111R1_025.ab1   341 
  253    UCD034F_D03_BE500206Sn30P028G01P036F111F1_025.ab1   201 
  341  C UCD034R_D03_BE500206Sn30P028G01P036F111R1_025.ab1   229 
  361    UCD034F_D03_BE500206Sn30P028G01P036F111F1_025.ab1   309 
  385  C UCD034R_D03_BE500206Sn30P028G01P036F111R1_025.ab1   185 
  433    UCD034F_D03_BE500206Sn30P028G01P036F111F1_025.ab1   381 
  441  C UCD034R_D03_BE500206Sn30P028G01P036F111R1_025.ab1   129 
  449    UCD034F_D03_BE500206Sn30P028G01P036F111F1_025.ab1   397 
  461  C UCD034R_D03_BE500206Sn30P028G01P036F111R1_025.ab1   109 
  469    UCD034F_D03_BE500206Sn30P028G01P036F111F1_025.ab1   417 
  497  C UCD034R_D03_BE500206Sn30P028G01P036F111R1_025.ab1    73 
  505    UCD034F_D03_BE500206Sn30P028G01P036F111F1_025.ab1   453 
Contig length: old 627, new 627

Contig length: old 627, new 627
New start: 0