No. words: 1159; after pruning: 1133


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 10.7 (1,1:530)  515  0.00 0.19 0.00  UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1        4   531 (48)  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1   (51)   529     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  264 nodes

 134 str. conn. components

Path
    1  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1   580 
  105    UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1    56 
  113  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1   468 
  129    UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1    80 
  145  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1   436 
  157    UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1   108 
  193  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1   388 
  205    UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1   156 
  209  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1   372 
  213    UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1   164 
  233  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1   348 
  245    UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1   196 
  253  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1   328 
  265    UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1   216 
  289  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1   292 
  301    UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1   252 
  353  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1   228 
  373    UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1   324 
  397  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1   184 
  445    UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1   396 
  449  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1   132 
  453    UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1   404 
  477  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1   104 
  485    UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1   436 
  505  C UCD034R_E01_BE500206Ta15P028G01P036F111R1_007.ab1    76 
  513    UCD034F_E01_BE500206Ta15P028G01P036F111F1_007.ab1   464 
Contig length: old 628, new 628

Contig length: old 628, new 628
New start: 0