No. words: 1135; after pruning: 1109


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:499)  493  0.00 0.00 0.00  UCD034F_G01_BE500206Ta17P028G01P036F111F1_003.ab1        1   500 (67)  C UCD034R_G01_BE500206Ta17P028G01P036F111R1_003.ab1   (68)   500     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C UCD034R_G01_BE500206Ta17P028G01P036F111R1_003.ab1   568 
  104    UCD034F_G01_BE500206Ta17P028G01P036F111F1_003.ab1    36 
  108  C UCD034R_G01_BE500206Ta17P028G01P036F111R1_003.ab1   461 
  156    UCD034F_G01_BE500206Ta17P028G01P036F111F1_003.ab1    88 
  160  C UCD034R_G01_BE500206Ta17P028G01P036F111R1_003.ab1   409 
  168    UCD034F_G01_BE500206Ta17P028G01P036F111F1_003.ab1   100 
  196  C UCD034R_G01_BE500206Ta17P028G01P036F111R1_003.ab1   373 
  200    UCD034F_G01_BE500206Ta17P028G01P036F111F1_003.ab1   132 
  272  C UCD034R_G01_BE500206Ta17P028G01P036F111R1_003.ab1   297 
  276    UCD034F_G01_BE500206Ta17P028G01P036F111F1_003.ab1   208 
  328  C UCD034R_G01_BE500206Ta17P028G01P036F111R1_003.ab1   241 
  332    UCD034F_G01_BE500206Ta17P028G01P036F111F1_003.ab1   264 
  340  C UCD034R_G01_BE500206Ta17P028G01P036F111R1_003.ab1   229 
  344    UCD034F_G01_BE500206Ta17P028G01P036F111F1_003.ab1   276 
  364  C UCD034R_G01_BE500206Ta17P028G01P036F111R1_003.ab1   205 
  376    UCD034F_G01_BE500206Ta17P028G01P036F111F1_003.ab1   308 
  408  C UCD034R_G01_BE500206Ta17P028G01P036F111R1_003.ab1   161 
  424    UCD034F_G01_BE500206Ta17P028G01P036F111F1_003.ab1   356 
  428  C UCD034R_G01_BE500206Ta17P028G01P036F111R1_003.ab1   141 
  432    UCD034F_G01_BE500206Ta17P028G01P036F111F1_003.ab1   364 
  472  C UCD034R_G01_BE500206Ta17P028G01P036F111R1_003.ab1    97 
  476    UCD034F_G01_BE500206Ta17P028G01P036F111F1_003.ab1   408 
Contig length: old 635, new 635

Contig length: old 635, new 635
New start: 0