No. words: 1153; after pruning: 1127


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:528)  516  0.00 0.00 0.19  UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1        1   529 (36)  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   (60)   528     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   588 
   68    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1     8 
   76  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   513 
   96    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1    36 
  100  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   489 
  112    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1    52 
  116  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   473 
  120    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1    60 
  124  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   465 
  128    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1    68 
  144  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   445 
  168    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   108 
  176  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   413 
  180    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   120 
  196  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   393 
  204    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   144 
  208  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   381 
  216    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   156 
  244  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   345 
  296    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   236 
  300  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   289 
  316    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   256 
  320  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   269 
  344    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   284 
  348  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   241 
  364    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   304 
  380  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   209 
  408    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   348 
  432  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   157 
  444    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   384 
  452  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   137 
  464    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   404 
  476  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1   113 
  480    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   420 
  500  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1    89 
  512    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   452 
  524  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1    65 
  532    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   472 
  544  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1    45 
  548    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   488 
  560  C UCD034R_A02_BE500206Ta19P028G01P036F111R1_016.ab1    29 
  572    UCD034F_A02_BE500206Ta19P028G01P036F111F1_016.ab1   512 
Contig length: old 624, new 625

Contig length: old 625, new 625
New start: 0