No. words: 1000; after pruning: 974


Histogram of relative pair offsets, for read pairs with multiple alignments:
 0     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.3 (1,1:664)  319  0.30 0.00 0.00  UCD018F_G09_BE518440LD08P028H03H091F1_067.ab1      317   651 (0)  C UCD018R_G09_BE518440LD08P028H03H091R1_067.ab1   (0)   349    15 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  164 nodes

 84 str. conn. components

Path
    1    UCD018F_G09_BE518440LD08P028H03H091F1_067.ab1     1 
  528  C UCD018R_G09_BE518440LD08P028H03H091R1_067.ab1   138 
  532    UCD018F_G09_BE518440LD08P028H03H091F1_067.ab1   532 
  536  C UCD018R_G09_BE518440LD08P028H03H091R1_067.ab1   130 
  552    UCD018F_G09_BE518440LD08P028H03H091F1_067.ab1   552 
  560  C UCD018R_G09_BE518440LD08P028H03H091R1_067.ab1   106 
  588    UCD018F_G09_BE518440LD08P028H03H091F1_067.ab1   588 
  592  C UCD018R_G09_BE518440LD08P028H03H091R1_067.ab1    74 
Contig length: old 665, new 665

Contig length: old 665, new 665
New start: 0