No. words: 934; after pruning: 908


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.8 (1,1:309)  300  0.00 0.65 0.00  UCD025F_B10_BE591555LD08P028G03P028G091F1_078.ab1        1   309 (198)  C UCD025R_B10_BE591555LD08P028G03P028G091R1_078.ab1   (116)   311     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  150 nodes

 77 str. conn. components

Path
    1  C UCD025R_B10_BE591555LD08P028G03P028G091R1_078.ab1   427 
  337    UCD025F_B10_BE591555LD08P028G03P028G091F1_078.ab1   219 
Contig length: old 624, new 625

Contig length: old 625, new 625
New start: 0