No. words: 940; after pruning: 914


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.9 (1,1:311)  302  0.00 0.64 0.00  UCD025F_C10_BE591555LD09P028G03P028G091F1_076.ab1        1   311 (199)  C UCD025R_C10_BE591555LD09P028G03P028G091R1_076.ab1   (117)   313     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1  C UCD025R_C10_BE591555LD09P028G03P028G091R1_076.ab1   430 
  270    UCD025F_C10_BE591555LD09P028G03P028G091F1_076.ab1   151 
Contig length: old 628, new 629

Contig length: old 629, new 629
New start: 0