No. words: 939; after pruning: 913


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.7 (1,1:311)  303  0.00 0.64 0.00  UCD025F_D10_BE591555LD10P028G03P028G091F1_074.ab1        1   311 (199)  C UCD025R_D10_BE591555LD10P028G03P028G091R1_074.ab1   (116)   313     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1  C UCD025R_D10_BE591555LD10P028G03P028G091R1_074.ab1   429 
  343    UCD025F_D10_BE591555LD10P028G03P028G091F1_074.ab1   225 
Contig length: old 627, new 628

Contig length: old 628, new 628
New start: 0