No. words: 947; after pruning: 921


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.2 (1,1:318)  314  0.00 0.31 0.00  UCD025F_F10_BE591555LD12P028G03P028G091F1_070.ab1        1   319 (192)  C UCD025R_F10_BE591555LD12P028G03P028G091R1_070.ab1   (116)   320     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  160 nodes

 82 str. conn. components

Path
    1  C UCD025R_F10_BE591555LD12P028G03P028G091R1_070.ab1   436 
  249    UCD025F_F10_BE591555LD12P028G03P028G091F1_070.ab1   132 
Contig length: old 628, new 628

Contig length: old 628, new 628
New start: 0