No. words: 1336; after pruning: 1310


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 3.1 (1,1:934)  379  1.50 0.00 0.00  UCD004F_H06_BF201830AS01P012B05B111F1_034.ab1      291   689 (0)  C UCD004R_H06_BF201830AS01P012B05B111R1_034.ab1   (2)   645   247 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  182 nodes

 93 str. conn. components

Path
    1    UCD004F_H06_BF201830AS01P012B05B111F1_034.ab1     1 
  401  C UCD004R_H06_BF201830AS01P012B05B111R1_034.ab1   535 
Contig length: old 935, new 935

Contig length: old 935, new 935
New start: 0