No. words: 1168; after pruning: 1142


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.9 (1,1:950)  206  1.38 0.00 0.00  UCD004F_C07_BF201830AT02P012B05B111F1_059.ab1      324   540 (0)  C UCD004R_C07_BF201830AT02P012B05B111R1_059.ab1   (0)   628   412 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  100 nodes

 52 str. conn. components

Path
    1    UCD004F_C07_BF201830AT02P012B05B111F1_059.ab1     1 
  519  C UCD004R_C07_BF201830AT02P012B05B111R1_059.ab1   433 
Contig length: old 951, new 951

Contig length: old 951, new 951
New start: 0