No. words: 1489; after pruning: 1463


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:910)  567  0.35 0.00 0.00  UCD004F_D07_BF201830LD01P012B05B111F1_057.ab1      171   748 (0)  C UCD004R_D07_BF201830LD01P012B05B111R1_057.ab1   (0)   741   164 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1    UCD004F_D07_BF201830LD01P012B05B111F1_057.ab1     1 
  363  C UCD004R_D07_BF201830LD01P012B05B111R1_057.ab1   549 
  371    UCD004F_D07_BF201830LD01P012B05B111F1_057.ab1   371 
  375  C UCD004R_D07_BF201830LD01P012B05B111R1_057.ab1   537 
  391    UCD004F_D07_BF201830LD01P012B05B111F1_057.ab1   391 
  395  C UCD004R_D07_BF201830LD01P012B05B111R1_057.ab1   517 
Contig length: old 911, new 911

Contig length: old 911, new 911
New start: 0