No. words: 1546; after pruning: 1507


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 2.8 (1,1:1)  201  3.93 0.00 0.00  UCD012R_F05_BF201830Sn28P025C08P012B111R1_037.ab1        2   230 (0)    UCD021R_F11_BF201830Sn28P025C08P012B111R2_085.ab1        1   229 (226) *

Pass: 1
#reads  #contigs (not counting singlets)
    1      1
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.4 (2,1:847)  449  0.00 0.00 0.00  UCD021R_F11_BF201830Sn28P025C08P012B111R2_085.ab1        4   455 (0)  C UCD021F_F11_BF201830Sn28P025C08P012B111F2_085.ab1   (17)   844   393 *

Pass: 3
#reads  #contigs (not counting singlets)
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       2 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    3    1

Chimera merges: 


Contig 1:  404 nodes

 190 str. conn. components

Path
    1  C UCD021F_F11_BF201830Sn28P025C08P012B111F2_085.ab1   861 
   21    UCD012R_F05_BF201830Sn28P025C08P012B111R1_037.ab1     8 
   34    UCD021R_F11_BF201830Sn28P025C08P012B111R2_085.ab1    20 
   38    UCD012R_F05_BF201830Sn28P025C08P012B111R1_037.ab1    25 
   42    UCD021R_F11_BF201830Sn28P025C08P012B111R2_085.ab1    28 
   86    UCD012R_F05_BF201830Sn28P025C08P012B111R1_037.ab1    73 
   94    UCD021R_F11_BF201830Sn28P025C08P012B111R2_085.ab1    80 
  351  C UCD021F_F11_BF201830Sn28P025C08P012B111F2_085.ab1   511 
  355    UCD021R_F11_BF201830Sn28P025C08P012B111R2_085.ab1   341 
  395  C UCD021F_F11_BF201830Sn28P025C08P012B111F2_085.ab1   467 
  399    UCD021R_F11_BF201830Sn28P025C08P012B111R2_085.ab1   385 
  403  C UCD021F_F11_BF201830Sn28P025C08P012B111F2_085.ab1   459 
  415    UCD021R_F11_BF201830Sn28P025C08P012B111R2_085.ab1   401 
  427  C UCD021F_F11_BF201830Sn28P025C08P012B111F2_085.ab1   435 
Contig length: old 861, new 861

Contig length: old 861, new 861
New start: 0