No. words: 1099; after pruning: 1073


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.6 (1,1:780)  305  0.63 0.00 0.31  UCD021F_H11_BF201830Sn30P025C08P012B111F2_081.ab1      447   764 (0)  C UCD021R_H11_BF201830Sn30P025C08P012B111R2_081.ab1   (0)   335    19 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1    UCD021F_H11_BF201830Sn30P025C08P012B111F2_081.ab1     1 
  505  C UCD021R_H11_BF201830Sn30P025C08P012B111R2_081.ab1   277 
  509    UCD021F_H11_BF201830Sn30P025C08P012B111F2_081.ab1   509 
  521  C UCD021R_H11_BF201830Sn30P025C08P012B111R2_081.ab1   261 
  529    UCD021F_H11_BF201830Sn30P025C08P012B111F2_081.ab1   529 
  533  C UCD021R_H11_BF201830Sn30P025C08P012B111R2_081.ab1   249 
  537    UCD021F_H11_BF201830Sn30P025C08P012B111F2_081.ab1   537 
  553  C UCD021R_H11_BF201830Sn30P025C08P012B111R2_081.ab1   229 
  561    UCD021F_H11_BF201830Sn30P025C08P012B111F2_081.ab1   561 
  569  C UCD021R_H11_BF201830Sn30P025C08P012B111R2_081.ab1   213 
  605    UCD021F_H11_BF201830Sn30P025C08P012B111F2_081.ab1   605 
  621  C UCD021R_H11_BF201830Sn30P025C08P012B111R2_081.ab1   161 
Contig length: old 781, new 781

Contig length: old 781, new 781
New start: 0