No. words: 1515; after pruning: 1489


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.8 (1,1:724)  660  2.38 0.00 0.00  UCD027F_B12_BF201830Sn32P025H07P036D021F1_094.ab1        1   715 (0)  C UCD027R_B12_BF201830Sn32P025H07P036D021R1_094.ab1   (75)   725    11 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C UCD027R_B12_BF201830Sn32P025H07P036D021R1_094.ab1   800 
  107    UCD027F_B12_BF201830Sn32P025H07P036D021F1_094.ab1    32 
  115  C UCD027R_B12_BF201830Sn32P025H07P036D021R1_094.ab1   686 
  119    UCD027F_B12_BF201830Sn32P025H07P036D021F1_094.ab1    44 
  123  C UCD027R_B12_BF201830Sn32P025H07P036D021R1_094.ab1   678 
Contig length: old 800, new 800

Contig length: old 800, new 800
New start: 0