No. words: 1300; after pruning: 1274


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.6 (1,1:696)  533  3.48 0.00 0.17  UCD027F_F10_BF201830Ta16P025H07P036D021F1_070.ab1       79   681 (0)  C UCD027R_F10_BF201830Ta16P025H07P036D021R1_070.ab1   (0)   619    18 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1    UCD027F_F10_BF201830Ta16P025H07P036D021F1_070.ab1     1 
   86  C UCD027R_F10_BF201830Ta16P025H07P036D021R1_070.ab1   612 
   94    UCD027F_F10_BF201830Ta16P025H07P036D021F1_070.ab1    94 
  122  C UCD027R_F10_BF201830Ta16P025H07P036D021R1_070.ab1   576 
  134    UCD027F_F10_BF201830Ta16P025H07P036D021F1_070.ab1   134 
  146  C UCD027R_F10_BF201830Ta16P025H07P036D021R1_070.ab1   552 
  190    UCD027F_F10_BF201830Ta16P025H07P036D021F1_070.ab1   190 
  194  C UCD027R_F10_BF201830Ta16P025H07P036D021R1_070.ab1   504 
  231    UCD027F_F10_BF201830Ta16P025H07P036D021F1_070.ab1   231 
  235  C UCD027R_F10_BF201830Ta16P025H07P036D021R1_070.ab1   463 
  247    UCD027F_F10_BF201830Ta16P025H07P036D021F1_070.ab1   247 
  255  C UCD027R_F10_BF201830Ta16P025H07P036D021R1_070.ab1   443 
Contig length: old 697, new 697

Contig length: old 697, new 697
New start: 0