No. words: 1986; after pruning: 1947


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 11.2 (1,1:7)  506  0.39 0.00 0.00  UCD012R_E04_BF201830Ta19P025C08P012B111R1_024.ab1        8   523 (0)    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1        1   516 (94) *

Pass: 1
#reads  #contigs (not counting singlets)
    1      1
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (2,1:845)  608  0.00 0.00 0.00  UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1        1   610 (0)  C UCD021F_E10_BF201830Ta19P025C08P012B111F2_072.ab1   (14)   839   230 *

Pass: 3
#reads  #contigs (not counting singlets)
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       2 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    3    1

Chimera merges: 


Contig 1:  806 nodes

 281 str. conn. components

Path
    1  C UCD021F_E10_BF201830Ta19P025C08P012B111F2_072.ab1   853 
   22    UCD012R_E04_BF201830Ta19P025C08P012B111R1_024.ab1    15 
   26    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1    12 
   30    UCD012R_E04_BF201830Ta19P025C08P012B111R1_024.ab1    23 
   42    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1    28 
   46    UCD012R_E04_BF201830Ta19P025C08P012B111R1_024.ab1    39 
   98    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1    84 
  114    UCD012R_E04_BF201830Ta19P025C08P012B111R1_024.ab1   107 
  126    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1   112 
  142    UCD012R_E04_BF201830Ta19P025C08P012B111R1_024.ab1   135 
  146    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1   132 
  154    UCD012R_E04_BF201830Ta19P025C08P012B111R1_024.ab1   147 
  162    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1   148 
  170    UCD012R_E04_BF201830Ta19P025C08P012B111R1_024.ab1   163 
  174    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1   160 
  178    UCD012R_E04_BF201830Ta19P025C08P012B111R1_024.ab1   171 
  182    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1   168 
  206    UCD012R_E04_BF201830Ta19P025C08P012B111R1_024.ab1   199 
  222    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1   208 
  477  C UCD021F_E10_BF201830Ta19P025C08P012B111F2_072.ab1   377 
  485    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1   471 
  493  C UCD021F_E10_BF201830Ta19P025C08P012B111F2_072.ab1   361 
  501    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1   487 
  503  C UCD021F_E10_BF201830Ta19P025C08P012B111F2_072.ab1   351 
  513    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1   499 
  517  C UCD021F_E10_BF201830Ta19P025C08P012B111F2_072.ab1   337 
  523    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1   509 
  529  C UCD021F_E10_BF201830Ta19P025C08P012B111F2_072.ab1   325 
  537    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1   523 
  545  C UCD021F_E10_BF201830Ta19P025C08P012B111F2_072.ab1   309 
  549    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1   535 
  557  C UCD021F_E10_BF201830Ta19P025C08P012B111F2_072.ab1   297 
  577    UCD021R_E10_BF201830Ta19P025C08P012B111R2_072.ab1   563 
  581  C UCD021F_E10_BF201830Ta19P025C08P012B111F2_072.ab1   273 
Contig length: old 853, new 853

Contig length: old 853, new 853
New start: 0