No. words: 2016; after pruning: 1964


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:-11)  416  0.24 0.00 0.00  UCD012R_F04_BF201830Ta20P025C08P012B111R1_022.ab1        1   421 (0)    UCD021R_F10_BF201830Ta20P025C08P012B111R2_070.ab1       12   432 (179) *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 3
             Gap  Score    
Merge:(0)   12    0.0 12.2 (2,1:835)  594  0.17 0.00 0.00  UCD021R_F10_BF201830Ta20P025C08P012B111R2_070.ab1       13   611 (0)  C UCD021F_F10_BF201830Ta20P025C08P012B111F2_070.ab1   (21)   835   237 *

Pass: 3
#reads  #contigs (not counting singlets)
    1      1
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
12       1        0

Offset
  0       2 

Pass 4
             Gap  Score    
Merge:(0)    0    0.0 2.2 (3,1:812)  122  1.56 0.00 0.00  UCD021F_F10_BF201830Ta20P025C08P012B111F2_070.ab1       24   151 (705)    UCD012F_F04_BF201830Ta20P025C08P012B111F1_022.ab1        1   128 (0) *

Pass: 4
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    4    1

Chimera merges: 


Contig 1:  764 nodes

 272 str. conn. components

Path
    1  C UCD021F_F10_BF201830Ta20P025C08P012B111F2_070.ab1   856 
   29    UCD012R_F04_BF201830Ta20P025C08P012B111R1_022.ab1     9 
   36    UCD021R_F10_BF201830Ta20P025C08P012B111R2_070.ab1    27 
   52    UCD012R_F04_BF201830Ta20P025C08P012B111R1_022.ab1    32 
   56    UCD021R_F10_BF201830Ta20P025C08P012B111R2_070.ab1    47 
   84    UCD012R_F04_BF201830Ta20P025C08P012B111R1_022.ab1    64 
   88    UCD021R_F10_BF201830Ta20P025C08P012B111R2_070.ab1    79 
  132    UCD012R_F04_BF201830Ta20P025C08P012B111R1_022.ab1   112 
  136    UCD021R_F10_BF201830Ta20P025C08P012B111R2_070.ab1   127 
  430  C UCD021F_F10_BF201830Ta20P025C08P012B111F2_070.ab1   427 
  432    UCD021R_F10_BF201830Ta20P025C08P012B111R2_070.ab1   423 
  472  C UCD021F_F10_BF201830Ta20P025C08P012B111F2_070.ab1   385 
  476    UCD021R_F10_BF201830Ta20P025C08P012B111R2_070.ab1   467 
  480  C UCD021F_F10_BF201830Ta20P025C08P012B111F2_070.ab1   377 
  508    UCD021R_F10_BF201830Ta20P025C08P012B111R2_070.ab1   499 
  512  C UCD021F_F10_BF201830Ta20P025C08P012B111F2_070.ab1   345 
  568    UCD021R_F10_BF201830Ta20P025C08P012B111R2_070.ab1   559 
  572  C UCD021F_F10_BF201830Ta20P025C08P012B111F2_070.ab1   285 
  750  C UCD012F_F04_BF201830Ta20P025C08P012B111F1_022.ab1    84 
  754  C UCD021F_F10_BF201830Ta20P025C08P012B111F2_070.ab1   103 
  766  C UCD012F_F04_BF201830Ta20P025C08P012B111F1_022.ab1    68 
  770  C UCD021F_F10_BF201830Ta20P025C08P012B111F2_070.ab1    87 
  778  C UCD012F_F04_BF201830Ta20P025C08P012B111F1_022.ab1    56 
  786  C UCD021F_F10_BF201830Ta20P025C08P012B111F2_070.ab1    71 
  810  C UCD012F_F04_BF201830Ta20P025C08P012B111F1_022.ab1    24 
  818  C UCD021F_F10_BF201830Ta20P025C08P012B111F2_070.ab1    39 
  822  C UCD012F_F04_BF201830Ta20P025C08P012B111F1_022.ab1    12 
  830  C UCD021F_F10_BF201830Ta20P025C08P012B111F2_070.ab1    27 
Contig length: old 856, new 856

Contig length: old 856, new 856
New start: 0