No. words: 1313; after pruning: 1274


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      3

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.7 (1,1:792)  163  6.25 0.48 0.00  UCD012R_H04_BF201830Ta22P025C08P012B111R1_018.ab1      136   343 (0)  C UCD021F_H10_BF201830Ta22P025C08P012B111F2_066.ab1   (0)   659   451 *

Pass: 3
#reads  #contigs (not counting singlets)
    1      1
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    
Merge:(0)    0   -0.3 -0.3 (2,1:827)  210  7.27 0.36 0.00  UCD021F_H10_BF201830Ta22P025C08P012B111F2_066.ab1        1   275 (384)    UCD012F_H04_BF201830Ta22P025C08P012B111F1_018.ab1       36   311 (0) *

Pass: 4
#reads  #contigs (not counting singlets)
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.3       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    1
    2    1

Chimera merges: 


Contig 1:  156 nodes

 81 str. conn. components

Path
    1    UCD012F_H04_BF201830Ta22P025C08P012B111F1_018.ab1     1 
  240    UCD021F_H10_BF201830Ta22P025C08P012B111F2_066.ab1   205 
  248    UCD012F_H04_BF201830Ta22P025C08P012B111F1_018.ab1   248 
  260    UCD021F_H10_BF201830Ta22P025C08P012B111F2_066.ab1   225 
  280    UCD012F_H04_BF201830Ta22P025C08P012B111F1_018.ab1   280 
  284    UCD021F_H10_BF201830Ta22P025C08P012B111F2_066.ab1   249 
  489  C UCD012R_H04_BF201830Ta22P025C08P012B111R1_018.ab1   340 
  507    UCD021F_H10_BF201830Ta22P025C08P012B111F2_066.ab1   472 
  511  C UCD012R_H04_BF201830Ta22P025C08P012B111R1_018.ab1   318 
  521    UCD021F_H10_BF201830Ta22P025C08P012B111F2_066.ab1   486 
  529  C UCD012R_H04_BF201830Ta22P025C08P012B111R1_018.ab1   300 
  547    UCD021F_H10_BF201830Ta22P025C08P012B111F2_066.ab1   512 
  551  C UCD012R_H04_BF201830Ta22P025C08P012B111R1_018.ab1   278 
Contig length: old 828, new 828

Contig length: old 828, new 828
New start: 0 
S Change at: 276; seg lengths: entry 1, contig 1