No. words: 1233; after pruning: 1207


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.4 (1,1:713)  502  0.96 0.00 0.00  UCD027F_G08_BF201830Td01P025H07P036D021F1_052.ab1      119   637 (0)  C UCD027R_G08_BF201830Td01P025H07P036D021R1_052.ab1   (0)   596    78 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1    UCD027F_G08_BF201830Td01P025H07P036D021F1_052.ab1     1 
  138  C UCD027R_G08_BF201830Td01P025H07P036D021R1_052.ab1   577 
  142    UCD027F_G08_BF201830Td01P025H07P036D021F1_052.ab1   142 
  162  C UCD027R_G08_BF201830Td01P025H07P036D021R1_052.ab1   553 
  173    UCD027F_G08_BF201830Td01P025H07P036D021F1_052.ab1   173 
  177  C UCD027R_G08_BF201830Td01P025H07P036D021R1_052.ab1   538 
  185    UCD027F_G08_BF201830Td01P025H07P036D021F1_052.ab1   185 
  189  C UCD027R_G08_BF201830Td01P025H07P036D021R1_052.ab1   526 
  229    UCD027F_G08_BF201830Td01P025H07P036D021F1_052.ab1   229 
  233  C UCD027R_G08_BF201830Td01P025H07P036D021R1_052.ab1   482 
  237    UCD027F_G08_BF201830Td01P025H07P036D021F1_052.ab1   237 
  245  C UCD027R_G08_BF201830Td01P025H07P036D021R1_052.ab1   470 
  261    UCD027F_G08_BF201830Td01P025H07P036D021F1_052.ab1   261 
  269  C UCD027R_G08_BF201830Td01P025H07P036D021R1_052.ab1   446 
  345    UCD027F_G08_BF201830Td01P025H07P036D021F1_052.ab1   345 
  353  C UCD027R_G08_BF201830Td01P025H07P036D021R1_052.ab1   362 
  369    UCD027F_G08_BF201830Td01P025H07P036D021F1_052.ab1   369 
  373  C UCD027R_G08_BF201830Td01P025H07P036D021R1_052.ab1   342 
Contig length: old 714, new 714

Contig length: old 714, new 714
New start: 0