No. words: 1098; after pruning: 1072


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.0 (1,1:607)  412  1.11 0.67 0.00  UCD005F_G05_BF473744AT02P012E05E111F1_035.ab1        1   450 (0)  C UCD005R_G05_BF473744AT02P012E05E111R1_035.ab1   (38)   610   158 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1  C UCD005R_G05_BF473744AT02P012E05E111R1_035.ab1   648 
   69    UCD005F_G05_BF473744AT02P012E05E111F1_035.ab1    28 
   73  C UCD005R_G05_BF473744AT02P012E05E111R1_035.ab1   576 
   77    UCD005F_G05_BF473744AT02P012E05E111F1_035.ab1    36 
  129  C UCD005R_G05_BF473744AT02P012E05E111R1_035.ab1   520 
  133    UCD005F_G05_BF473744AT02P012E05E111F1_035.ab1    92 
  149  C UCD005R_G05_BF473744AT02P012E05E111R1_035.ab1   500 
  153    UCD005F_G05_BF473744AT02P012E05E111F1_035.ab1   112 
  257  C UCD005R_G05_BF473744AT02P012E05E111R1_035.ab1   392 
  261    UCD005F_G05_BF473744AT02P012E05E111F1_035.ab1   220 
  289  C UCD005R_G05_BF473744AT02P012E05E111R1_035.ab1   360 
  309    UCD005F_G05_BF473744AT02P012E05E111F1_035.ab1   268 
  321  C UCD005R_G05_BF473744AT02P012E05E111R1_035.ab1   328 
  325    UCD005F_G05_BF473744AT02P012E05E111F1_035.ab1   284 
  333  C UCD005R_G05_BF473744AT02P012E05E111R1_035.ab1   316 
  341    UCD005F_G05_BF473744AT02P012E05E111F1_035.ab1   300 
  345  C UCD005R_G05_BF473744AT02P012E05E111R1_035.ab1   304 
  357    UCD005F_G05_BF473744AT02P012E05E111F1_035.ab1   316 
  361  C UCD005R_G05_BF473744AT02P012E05E111R1_035.ab1   288 
Contig length: old 648, new 648

Contig length: old 648, new 648
New start: 0