No. words: 1151; after pruning: 1125


Histogram of relative pair offsets, for read pairs with multiple alignments:
49     4
98     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.0 (1,1:526)  503  0.00 0.00 0.00  UCD005F_B11_BF475068AS02P012H06H121F1_093.ab1        3   527 (52)  C UCD005R_B11_BF475068AS02P012H06H121R1_093.ab1   (47)   525     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  264 nodes

 134 str. conn. components

Path
    1  C UCD005R_B11_BF475068AS02P012H06H121R1_093.ab1   572 
  143    UCD005F_B11_BF475068AS02P012H06H121F1_093.ab1    98 
  147  C UCD005R_B11_BF475068AS02P012H06H121R1_093.ab1   426 
  271    UCD005F_B11_BF475068AS02P012H06H121F1_093.ab1   226 
  431  C UCD005R_B11_BF475068AS02P012H06H121R1_093.ab1   142 
  463    UCD005F_B11_BF475068AS02P012H06H121F1_093.ab1   418 
Contig length: old 624, new 624

Contig length: old 624, new 624
New start: 0