No. words: 463; after pruning: 437


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.4 (1,1:185)  123  0.00 0.00 0.69  UCD013R_A04_BF475068Sn25P025G11P012H121R1_032.ab1       44   187 (133)  C UCD022_F09_BF475068Sn25P025G11P012H121F2_069.ab1   (0)   143     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  70 nodes

 37 str. conn. components

Path
    1    UCD013R_A04_BF475068Sn25P025G11P012H121R1_032.ab1     1 
  136  C UCD022_F09_BF475068Sn25P025G11P012H121F2_069.ab1    51 
  144    UCD013R_A04_BF475068Sn25P025G11P012H121R1_032.ab1   144 
  168  C UCD022_F09_BF475068Sn25P025G11P012H121F2_069.ab1    19 
  176    UCD013R_A04_BF475068Sn25P025G11P012H121R1_032.ab1   176 
Contig length: old 320, new 320

Contig length: old 320, new 320
New start: 0