No. words: 378; after pruning: 352


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    1   -0.3 -0.3 (1,1:182)   85  2.52 0.84 0.84  UCD013R_E03_BF475068Ta21P025G11P012H121R1_023.ab1       65   183 (75)  C UCD022_B09_BF475068Ta21P025G11P012H121F2_077.ab1   (0)   120     2 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.3       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  46 nodes

 25 str. conn. components

Path
    1    UCD013R_E03_BF475068Ta21P025G11P012H121R1_023.ab1     1 
Contig length: old 258, new 258

Contig length: old 258, new 258
New start: 0