No. words: 869; after pruning: 843


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.2 (1,1:266)  251  1.12 0.00 0.00  UCD007F_C05_BG274019LD09P012F02P012F081F1_043.ab1        1   267 (129)  C UCD007R_C05_BG274019LD09P012F02P012F081R1_043.ab1   (206)   267     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  126 nodes

 65 str. conn. components

Path
    1  C UCD007R_C05_BG274019LD09P012F02P012F081R1_043.ab1   473 
  302    UCD007F_C05_BG274019LD09P012F02P012F081F1_043.ab1    96 
Contig length: old 602, new 602

Contig length: old 602, new 602
New start: 0