No. words: 774; after pruning: 748


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    4   -1.3 -1.3 (1,1:545)  139  5.08 0.00 0.00  UCD024F_C08_BG313362TU01P012E03P012E091F1_060.ab1      366   542 (51)  C UCD024R_C08_BG313362TU01P012E03P012E091R1_060.ab1   (0)   181     5 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.3       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  72 nodes

 38 str. conn. components

Path
    1    UCD024F_C08_BG313362TU01P012E03P012E091F1_060.ab1     1 
Contig length: old 593, new 593

Contig length: old 593, new 593
New start: 0