No. words: 1088; after pruning: 1062


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:455)  445  0.22 0.00 0.00  UCD021F_F05_BG605258Sn30P025C05P012H081F2_037.ab1        1   456 (60)  C UCD021R_F05_BG605258Sn30P025C05P012H081R2_037.ab1   (116)   456     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C UCD021R_F05_BG605258Sn30P025C05P012H081R2_037.ab1   572 
  124    UCD021F_F05_BG605258Sn30P025C05P012H081F2_037.ab1     8 
  128  C UCD021R_F05_BG605258Sn30P025C05P012H081R2_037.ab1   445 
  477    UCD021F_F05_BG605258Sn30P025C05P012H081F2_037.ab1   361 
  481  C UCD021R_F05_BG605258Sn30P025C05P012H081R2_037.ab1    92 
  485    UCD021F_F05_BG605258Sn30P025C05P012H081F2_037.ab1   369 
  489  C UCD021R_F05_BG605258Sn30P025C05P012H081R2_037.ab1    84 
  565    UCD021F_F05_BG605258Sn30P025C05P012H081F2_037.ab1   449 
Contig length: old 632, new 632

Contig length: old 632, new 632
New start: 0