No. words: 1027; after pruning: 1001


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.9 (1,1:475)  461  0.21 0.00 0.00  UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1        5   476 (79)  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1   (0)   472     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1     1 
   71  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1   406 
  107    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   107 
  119  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1   358 
  123    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   123 
  131  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1   346 
  167    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   167 
  171  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1   306 
  187    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   187 
  191  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1   286 
  251    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   251 
  263  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1   214 
  311    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   311 
  315  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1   162 
  319    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   319 
  323  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1   154 
  331    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   331 
  335  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1   142 
  347    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   347 
  351  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1   126 
  359    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   359 
  367  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1   110 
  375    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   375 
  379  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1    98 
  391    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   391 
  399  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1    78 
  411    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   411 
  415  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1    62 
  427    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   427 
  431  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1    46 
  443    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   443 
  447  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1    30 
  451    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   451 
  459  C UCD014R_E10_BG605258Ta13P025A05P012H081R1_072.ab1    18 
  467    UCD014F_E10_BG605258Ta13P025A05P012H081F1_072.ab1   467 
Contig length: old 555, new 555

Contig length: old 555, new 555
New start: 0