No. words: 841; after pruning: 815


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.6 (1,1:476)  339  1.65 0.00 0.00  UCD014F_F10_BG605258Ta14P025A05P012H081F1_070.ab1       60   423 (0)  C UCD014R_F10_BG605258Ta14P025A05P012H081R1_070.ab1   (0)   418    55 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  166 nodes

 85 str. conn. components

Path
    1    UCD014F_F10_BG605258Ta14P025A05P012H081F1_070.ab1     1 
   79  C UCD014R_F10_BG605258Ta14P025A05P012H081R1_070.ab1   399 
   87    UCD014F_F10_BG605258Ta14P025A05P012H081F1_070.ab1    87 
  111  C UCD014R_F10_BG605258Ta14P025A05P012H081R1_070.ab1   367 
  119    UCD014F_F10_BG605258Ta14P025A05P012H081F1_070.ab1   119 
  131  C UCD014R_F10_BG605258Ta14P025A05P012H081R1_070.ab1   347 
  167    UCD014F_F10_BG605258Ta14P025A05P012H081F1_070.ab1   167 
  179  C UCD014R_F10_BG605258Ta14P025A05P012H081R1_070.ab1   299 
  187    UCD014F_F10_BG605258Ta14P025A05P012H081F1_070.ab1   187 
  191  C UCD014R_F10_BG605258Ta14P025A05P012H081R1_070.ab1   287 
  203    UCD014F_F10_BG605258Ta14P025A05P012H081F1_070.ab1   203 
  207  C UCD014R_F10_BG605258Ta14P025A05P012H081R1_070.ab1   271 
Contig length: old 477, new 477

Contig length: old 477, new 477
New start: 0